STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_05238L-asparaginase. (292 aa)    
Predicted Functional Partners:
AG1IA_02066
Asparagine synthase.
     
 0.817
AG1IA_05807
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
    
  0.788
AG1IA_06119
Aminotransferase class I and II domain-containing protein.
   
 0.774
AG1IA_01206
Aspartate aminotransferase.
   
 0.774
AG1IA_08343
Protein ura1.
    
  0.759
AG1IA_05987
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
     
 0.759
AG1IA_08531
Nitrilase, putative.
  
 
  0.757
AG1IA_00568
Aminotransferase.
     
 0.741
AG1IA_05616
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
   
 
 0.709
AG1IA_08342
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
  0.705
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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