STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_03413Lactococcus lactis bacteriophage major capsid domain-containing protein. (542 aa)    
Predicted Functional Partners:
AG1IA_01623
3-hydroxy-3-methylglutaryl coenzyme A reductase.
   
 
 0.923
AG1IA_06451
Chromatin assembly complex protein.
    
 
 0.919
AG1IA_01963
Sterol regulatory element binding protein cleavage-activating protein.
   
 0.880
AG1IA_00242
Patched sphingolipid transporter (Ncr1), putative.
   
 0.880
AG1IA_07590
Uncharacterized protein.
    
   0.855
AG1IA_07150
Uncharacterized protein.
    
   0.855
AG1IA_03411
Uncharacterized protein.
 
  
   0.719
AG1IA_04724
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 
 0.716
AG1IA_03412
Uncharacterized protein.
 
  
   0.701
AG1IA_09357
Uncharacterized protein.
    
 
 0.634
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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