STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_05171Alpha amylase. (205 aa)    
Predicted Functional Partners:
AG1IA_05172
Glycoside hydrolase family 13 protein.
 
     0.943
AG1IA_07660
General amidase.
    
 0.865
AG1IA_06688
Amino acid transporter.
    
 0.865
AG1IA_06689
Methionine permease.
    
 0.865
AG1IA_01012
APC amino acid permease.
    
 0.865
AG1IA_02836
1,4-alpha-glucan branching enzyme.
  
 
 0.740
AG1IA_02835
Putative 1,4-alpha-glucan branching enzyme from glycoside hydrolase family GH13.
  
 
 0.740
AG1IA_05754
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.719
AG1IA_04016
Glycoside hydrolase family 13 protein.
 
   
 0.719
AG1IA_06066
Alpha-galactosidase 5; Belongs to the glycosyl hydrolase 27 family.
   
 
  0.706
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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