STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_046815-oxoprolinase. (683 aa)    
Predicted Functional Partners:
AG1IA_04683
Cytoplasmic protein.
 
  
 0.981
AG1IA_07649
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.802
AG1IA_07766
NAD-specific glutamate dehydrogenase.
    
 0.796
AG1IA_08222
Lincomycin-condensing protein lmbA.
    
 0.785
AG1IA_02781
Gamma-glutamyltranspeptidase.
    
 0.785
AG1IA_05987
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
 
  0.759
AG1IA_05490
Glutamate synthase.
     
 0.759
AG1IA_01867
Ubiquitin.
    
  0.719
AG1IA_06751
Proline dehydrogenase.
    
  0.710
AG1IA_00338
NADH-ubiquinone oxidoreductase 23 kDa subunit.
   
 
  0.704
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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