STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_03217Peptidase C14. (798 aa)    
Predicted Functional Partners:
AG1IA_02838
Set1 complex component swd1.
    
 0.777
AG1IA_01068
COMPASS complex protein.
    
 0.766
AG1IA_04717
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.727
AG1IA_08320
Protein transporter SEC13; Belongs to the WD repeat SEC13 family.
    
 0.720
AG1IA_08159
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.719
AG1IA_09363
Serine/threonine kinase.
    
 0.716
AG1IA_03809
Histone H2A; Belongs to the histone H2A family.
   
 0.711
AG1IA_09143
Nuclear pore protein seh1; Belongs to the WD repeat SEC13 family.
   
 0.707
AG1IA_07324
RNA recognition motif domain-containing protein.
    
 0.682
AG1IA_07323
Setd1a protein.
    
 0.682
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.