STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_03176CT20 domain-containing protein. (513 aa)    
Predicted Functional Partners:
AG1IA_00419
SWR1-complex protein 4.
    
 0.988
AG1IA_03649
NuA4 domain-containing protein.
    
 0.987
AG1IA_00506
Histone acetyltransferase SAGA, TRRAP/TRA1 component, PI-3 kinase superfamily TRA1; Belongs to the PI3/PI4-kinase family.
    
 0.982
AG1IA_06163
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.973
AG1IA_01182
Enhancer of polycomb-like protein.
    
 0.973
AG1IA_07603
YEATS family protein.
    
 0.971
AG1IA_02817
Actin-related protein Arp4p; Belongs to the actin family.
    
 0.964
AG1IA_04645
Chromatin modification-related protein EAF3.
   
 0.963
AG1IA_04644
PAPA-1 domain-containing protein.
   
 0.963
AG1IA_07961
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.961
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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