STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_03138Smr domain-containing protein. (1398 aa)    
Predicted Functional Partners:
AG1IA_03023
Uncharacterized protein.
   
   0.796
AG1IA_08194
NADH-ubiquinone oxidoreductase b18 subunit (NDUFB7) domain-containing protein.
   
   0.769
AG1IA_01668
Uncharacterized protein.
   
   0.667
AG1IA_04278
ETC complex I subunit conserved region domain-containing protein.
   
   0.662
AG1IA_04413
Zf-CHCC domain-containing protein.
   
   0.658
AG1IA_07930
NADH-ubiquinone oxidoreductase.
   
   0.649
AG1IA_00072
Uncharacterized protein.
   
   0.633
AG1IA_00446
Uncharacterized protein.
    
   0.626
AG1IA_09832
NDUFB10 domain-containing protein.
    
   0.616
AG1IA_06944
NADH-ubiquinone oxidoreductase 21kDa subunit.
    
   0.615
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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