STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_02373Rhomboid domain-containing protein. (981 aa)    
Predicted Functional Partners:
AG1IA_07713
Proteolysis and peptidolysis-related protein.
   
 0.809
AG1IA_00163
Band 7 domain-containing protein.
   
 0.754
AG1IA_04581
Inner membrane AAA protease Yta12-like protein.
   
 
 0.736
AG1IA_02721
Prohibitin.
   
 0.713
AG1IA_00674
Stomatin family protein.
   
 0.670
AG1IA_01258
Uncharacterized protein.
    
 0.618
AG1IA_07006
Ribosomal l35 domain-containing protein.
     
 0.604
AG1IA_00456
AAA domain-containing protein.
     
 0.604
AG1IA_09098
Transmembrane GTPase fzo1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 
 0.587
AG1IA_03229
Peroxidase; Belongs to the peroxidase family.
   
 
 0.586
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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