STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_03502Vacuolar protein sorting 26. (369 aa)    
Predicted Functional Partners:
AG1IA_00775
Retrograde transporter.
   
 0.999
AG1IA_07760
PX domain-containing protein.
    
 0.988
AG1IA_06760
Vacuolar protein sorting-associated protein 35.
   
 0.984
AG1IA_06761
Vacuolar protein sorting-associated protein 35.
   
 0.984
AG1IA_09123
Protein transporter.
   
 
 0.959
AG1IA_00444
Vacuolar protein sorting-associated protein vps17.
    
 
 0.907
AG1IA_06129
Lipid binding protein.
    
 
 0.816
AG1IA_02317
Sorting nexin-41.
   
 
 0.788
AG1IA_01707
Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.
    
 
 0.780
AG1IA_09825
Uncharacterized protein.
    
 
 0.775
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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