STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_02113Ribosomal s21e domain-containing protein. (155 aa)    
Predicted Functional Partners:
AG1IA_02452
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.981
AG1IA_07353
Ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family.
   
   0.980
AG1IA_02391
Ribosomal l37e domain-containing protein.
   
 
 0.977
AG1IA_05108
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.973
AG1IA_00593
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
   0.972
AG1IA_02426
Ribosomal l7Ae/L30e/S12e/Gadd45 family domain-containing protein.
   
   0.962
AG1IA_05982
Ribosomal l44 domain-containing protein; Belongs to the eukaryotic ribosomal protein eL42 family.
   
   0.959
AG1IA_00071
Uncharacterized protein.
   
 
 0.953
AG1IA_03329
Eukaryotic translation initiation factor 5C; Belongs to the universal ribosomal protein uS7 family.
   
   0.950
AG1IA_07174
LTV domain-containing protein.
    
   0.949
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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