STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_03594BTB domain-containing protein. (296 aa)    
Predicted Functional Partners:
AG1IA_00927
Ribosomal l27 domain-containing protein.
   
 
 0.886
AG1IA_05546
MRP-L46 domain-containing protein.
   
 
 0.883
AG1IA_02460
Ribosomal protein L23.
   
 
 0.880
AG1IA_05766
Ribosomal l33 domain-containing protein.
   
 
 0.877
AG1IA_02126
50S ribosomal protein L3.
   
 
 0.877
AG1IA_00425
Ribosomal l22p/L17e domain-containing protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.877
AG1IA_04466
50S ribosomal protein L4.
   
 
 0.873
AG1IA_02801
Ribosomal l19 domain-containing protein.
   
 
 0.873
AG1IA_03712
MRP-L47 domain-containing protein.
   
 
 0.873
AG1IA_09786
Ribosomal l30p/L7e domain-containing protein.
   
 
 0.866
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.