STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_02894Citrate transporter; Belongs to the mitochondrial carrier (TC 2.A.29) family. (306 aa)    
Predicted Functional Partners:
AG1IA_02403
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
 
 
 
 0.797
AG1IA_02234
Polygalacturonase.
     
 0.762
AG1IA_04460
Eukaryotic ADP/ATP carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
0.742
AG1IA_08539
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.716
AG1IA_05287
Peroxysomal citrate synthase.
   
 
 0.716
AG1IA_01157
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.716
AG1IA_00283
Developmentally regulated GTP binding protein 1.
    
   0.700
AG1IA_01120
Isocitrate lyase.
   
  
 0.699
MDM34
Mitochondrial distribution and morphology protein 34; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. MDM34 is required for the interaction of the ER-resident membrane protein MMM1 and the outer mitochondrial membrane-resident beta-barrel protein MDM10.
   
   0.618
AG1IA_07253
Papain family cysteine protease domain-containing protein; Belongs to the peptidase C1 family.
    
   0.613
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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