STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_02524Delta24(24-1) sterol reductase. (473 aa)    
Predicted Functional Partners:
AG1IA_05539
Fatty acid hydroxylase; Belongs to the sterol desaturase family.
   
 0.970
AG1IA_06235
Delta-sterol C-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family.
   
 
 0.969
AG1IA_01924
Squalene epoxidase.
   
 
 0.969
AG1IA_07177
C-3 sterol dehydrogenase.
   
 
 0.960
AG1IA_05586
Erg28 domain-containing protein.
   
 
 0.958
AG1IA_03182
C-14 sterol reductase.
  
 
0.958
AG1IA_08334
C-4 methyl sterol oxidase; Belongs to the sterol desaturase family.
   
 0.957
AG1IA_07096
C-4 methyl sterol oxidase; Belongs to the sterol desaturase family.
   
 0.957
AG1IA_03459
C-4 methylsterol oxidase, putative; Belongs to the sterol desaturase family.
   
 0.957
AG1IA_10344
Cytochrome P450 domain-containing protein.
   
 0.886
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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