STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_02987Glycosyl hydrolases family 18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family. (274 aa)    
Predicted Functional Partners:
AG1IA_02986
Glycosyl hydrolases family 18 domain-containing protein.
 
      0.900
AG1IA_08552
COX6B domain-containing protein.
   
 0.861
AG1IA_08571
COX5B domain-containing protein.
   
 0.845
AG1IA_06576
COX5A domain-containing protein.
   
 0.792
AG1IA_07247
Endochitinase.
  
  
 
0.753
AG1IA_06193
Glycoside hydrolase family 18 and carbohydrate-binding module family 5 protein; Belongs to the glycosyl hydrolase 18 family.
  
  
 
0.735
AG1IA_09152
GAT domain-containing protein.
     
 0.697
AG1IA_05879
QCR10 domain-containing protein.
   
 0.656
AG1IA_07319
UcrQ domain-containing protein.
   
  0.649
AG1IA_09200
Basic region leucine zipper domain-containing protein.
   
 0.644
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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