STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_02518PDCD2_C domain-containing protein. (488 aa)    
Predicted Functional Partners:
AG1IA_07745
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.787
AG1IA_04453
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.641
AG1IA_06914
Uncharacterized protein.
   
 
 0.524
AG1IA_06915
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
 
 0.524
AG1IA_03216
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
 
 0.524
AG1IA_03893
APC/C activator protein CDC20 (Cell division control protein 20).
   
 
 0.498
AG1IA_04428
RNA recognition motif domain-containing protein.
      
 0.430
AG1IA_05493
Uncharacterized protein.
    
   0.429
AG1IA_05346
CHORD domain-containing protein.
    
   0.429
AG1IA_03343
Vacuolar ATP synthase proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.
    
   0.402
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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