STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_00886E3 ubiquitin-protein ligase synoviolin. (859 aa)    
Predicted Functional Partners:
AG1IA_06603
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.995
AG1IA_03767
MMS2 protein; Belongs to the aldehyde dehydrogenase family.
   
 0.995
AG1IA_02104
Uncharacterized protein.
   
 0.993
AG1IA_09499
Cell division cycle protein 48; Belongs to the AAA ATPase family.
    
 0.984
AG1IA_04128
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 0.967
AG1IA_01867
Ubiquitin.
    
 0.947
AG1IA_01623
3-hydroxy-3-methylglutaryl coenzyme A reductase.
   
 
 0.912
AG1IA_06643
UBA domain-containing protein.
    
 0.884
AG1IA_02027
Endoplasmic reticulum protein.
    
 0.878
AG1IA_02375
Uncharacterized protein.
    
 0.877
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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