STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_01398TPR_1 domain-containing protein. (292 aa)    
Predicted Functional Partners:
AG1IA_01718
Leo1 domain-containing protein.
    
 0.998
AG1IA_09985
BZIP transcription factor domain-containing protein.
   
 0.879
AG1IA_10338
Uncharacterized protein.
   
 0.879
AG1IA_04776
Hamartin domain-containing protein.
   
 0.879
AG1IA_04775
Uncharacterized protein.
   
 0.879
AG1IA_00217
Heat shock protein 82.
   
 0.879
AG1IA_03989
Acetyl/propionyl CoA carboxylase, beta subunit.
  
 0.869
AG1IA_02210
RNA polymerase II-associated protein.
    
 0.845
AG1IA_05195
Cell division control protein 16.
    
 0.844
AG1IA_05517
APC10 domain-containing protein.
    
 0.843
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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