STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_00110Reovirus sigma C capsid domain-containing protein. (203 aa)    
Predicted Functional Partners:
AG1IA_08587
Multicopper oxidase domain-containing protein.
   
 0.997
AG1IA_05948
Serglycin domain-containing protein.
   
 0.997
AG1IA_03962
Pkinase domain-containing protein.
   
 0.997
AG1IA_08583
Protein binding protein.
    
 0.960
AG1IA_04334
Tuberin.
    
 0.926
AG1IA_03320
Uncharacterized protein.
    
 0.912
AG1IA_06229
Uncharacterized protein.
   
 0.911
AG1IA_00349
Velvet domain-containing protein.
   
 0.911
AG1IA_08703
Jumonji superfamily protein.
   
 0.902
AG1IA_04876
Arm domain-containing protein.
   
 0.895
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.