STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_01281Malate dehydrogenase. (376 aa)    
Predicted Functional Partners:
AG1IA_06119
Aminotransferase class I and II domain-containing protein.
   
 0.954
AG1IA_08539
Citrate synthase; Belongs to the citrate synthase family.
  
 0.937
AG1IA_05287
Peroxysomal citrate synthase.
  
 0.937
AG1IA_01157
Citrate synthase; Belongs to the citrate synthase family.
  
 0.937
AG1IA_06210
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 0.930
AG1IA_01206
Aspartate aminotransferase.
   
 0.908
AG1IA_01454
mRNA transport regulator.
  
 0.905
AG1IA_09505
Aspartate ammonia lyase.
  
 0.880
AG1IA_09504
Aspartate ammonia lyase.
  
 0.880
AG1IA_04187
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 
 0.879
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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