STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_00039Mandelate racemase/muconate lactonizing enzyme. (438 aa)    
Predicted Functional Partners:
AG1IA_01014
Tryptophan synthase.
    
  0.803
AG1IA_02683
Branched-chain-amino-acid aminotransferase.
    
 0.672
AG1IA_01681
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.670
AG1IA_00569
Uncharacterized protein.
  
 
 0.670
AG1IA_10173
Pyruvate kinase, alpha/beta domain-containing protein.
  
 0.654
AG1IA_07560
Glycoside hydrolase family 15 and carbohydrate-binding module family 20.
  
 0.654
AG1IA_04357
Glycosyl hydrolases family 15 domain-containing protein.
  
 0.654
AG1IA_04992
Glucoamylase.
  
 0.654
AG1IA_02881
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.654
AG1IA_02079
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
     
 0.627
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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