STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_00602Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (265 aa)    
Predicted Functional Partners:
AG1IA_02720
PTPS domain-containing protein.
    
 0.862
AG1IA_02876
Dihydrofolate reductase domain-containing protein; Belongs to the dihydrofolate reductase family.
   
 
 0.806
AG1IA_09154
Phosphopantothenoylcysteine decarboxylase.
   
 
 0.672
AG1IA_03249
Thymidylate synthase.
   
 
 0.672
AG1IA_04155
Electron transfer protein 1.
   
 0.669
AG1IA_09985
BZIP transcription factor domain-containing protein.
    
  0.664
AG1IA_10338
Uncharacterized protein.
    
  0.664
AG1IA_04776
Hamartin domain-containing protein.
    
  0.664
AG1IA_04775
Uncharacterized protein.
    
  0.664
AG1IA_00217
Heat shock protein 82.
    
  0.664
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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