STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_00165Histone deacetylase RPD3. (1264 aa)    
Predicted Functional Partners:
AG1IA_01718
Leo1 domain-containing protein.
    
 0.985
AG1IA_03409
Uncharacterized protein.
    
 0.948
AG1IA_08390
Uncharacterized protein.
   
 0.947
AG1IA_06564
Sin3a_C domain-containing protein.
   
 0.941
AG1IA_01842
Fasciclin domain-containing protein.
   
 0.941
AG1IA_04234
SHREC complex subunit Mit1.
   
 0.928
AG1IA_04843
HhH-GPD domain-containing protein.
    
 0.917
AG1IA_04645
Chromatin modification-related protein EAF3.
    
 0.906
AG1IA_04644
PAPA-1 domain-containing protein.
    
 0.906
AG1IA_07650
PAH domain-containing protein.
   
 0.899
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.