STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_00024Uncharacterized protein. (493 aa)    
Predicted Functional Partners:
AG1IA_00856
Acetolactate synthase.
  
 0.895
AG1IA_05800
Homocitrate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 0.880
AG1IA_00592
Aconitase.
  
 0.873
AG1IA_00591
Aconitase.
  
 0.873
AG1IA_04187
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.855
AG1IA_05543
HMGL-like domain-containing protein.
  
 0.853
AG1IA_00222
Acetolactate synthase.
  
 0.811
AG1IA_05328
Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis.
  
 0.746
AG1IA_03397
Fumarate reductase.
  
 0.725
AG1IA_01210
Argininosuccinate lyase.
  
 
 0.724
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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