STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE18033.1Hypothetical protein; KEGG: mmp:MMP0898 cellulose-binding. (130 aa)    
Predicted Functional Partners:
AEE18635.1
Hypothetical protein; KEGG: tan:TA04875 ubiquitin carboxyl-terminal hydrolase.
  
     0.733
AEE18633.1
KEGG: nve:NEMVE_v1g222495 hypothetical protein; manually curated; PFAM: surface antigen variable number repeat-containing protein.
  
     0.729
AEE18632.1
KEGG: nve:NEMVE_v1g222495 hypothetical protein.
  
     0.717
AEE19519.1
KEGG: chu:CHU_1774 hypothetical protein.
  
     0.684
AEE19121.1
PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; KEGG: zpr:ZPR_3384 multicopper oxidase.
   
 
 0.662
AEE19732.1
KEGG: rbi:RB2501_05665 hypothetical protein.
  
     0.654
AEE18034.1
KEGG: cat:CA2559_07766 hypothetical protein.
       0.552
AEE18035.1
KEGG: cmi:CMM_0935 hypothetical protein.
       0.551
AEE19404.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sse:Ssed_0993 glyoxalase/dioxygenase superfamily protein.
  
     0.537
AEE18296.1
PFAM: Alginate lyase 2; KEGG: cat:CA2559_11483 hypothetical protein.
  
     0.517
Your Current Organism:
Dokdonia sp. 4H375
NCBI taxonomy Id: 983548
Other names: D. sp. 4H-3-7-5, Dokdonia sp. 4H-3-7-5, Krokinobacter sp. 4H-3-7-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.