STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE19599.1KEGG: gfo:GFO_0237 hypothetical protein. (108 aa)    
Predicted Functional Partners:
AEE19600.1
KEGG: fjo:Fjoh_1912 1-aminocyclopropane-1-carboxylate deaminase-like protein.
       0.826
AEE19601.1
KEGG: cat:CA2559_00645 hemagglutinin; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Peptidoglycan-binding lysin domain; SMART: Lysozyme subfamily 2; Peptidoglycan-binding LysM.
       0.803
hemL
Glutamate-1-semialdehyde-2,1-aminomutase; KEGG: gfo:GFO_0240 glutamate-1-semialdehyde aminotransferase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III.
       0.654
AEE20429.1
KEGG: rbi:RB2501_15349 hypothetical protein.
  
     0.597
AEE19598.1
Hypothetical protein; Manually curated; KEGG: gfo:GFO_0236 hypothetical protein.
       0.593
AEE19597.1
KEGG: cat:CA2559_00590 putative lipoprotein.
 
     0.502
AEE19421.1
KEGG: cat:CA2559_05135 hypothetical protein.
  
     0.453
AEE20105.1
KEGG: cat:CA2559_08591 hypothetical protein.
  
     0.439
AEE20770.1
KEGG: cat:CA2559_10588 hypothetical protein.
  
     0.436
AEE19603.1
Hypothetical protein; KEGG: tpd:Teth39_1777 DNA adenine methylase.
       0.433
Your Current Organism:
Dokdonia sp. 4H375
NCBI taxonomy Id: 983548
Other names: D. sp. 4H-3-7-5, Dokdonia sp. 4H-3-7-5, Krokinobacter sp. 4H-3-7-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.