STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE20638.1PFAM: major facilitator superfamily MFS_1; KEGG: cat:CA2559_10238 bicyclomycin resistance protein. (404 aa)    
Predicted Functional Partners:
AEE20637.1
KEGG: cat:CA2559_10233 hypothetical protein.
       0.538
AEE18454.1
KEGG: cat:CA2559_07065 hypothetical protein.
  
     0.496
AEE19486.1
KEGG: rbi:RB2501_14879 hypothetical protein.
  
     0.416
AEE19066.1
PFAM: Carboxymuconolactone decarboxylase; KEGG: cat:CA2559_02815 probable fusion protein.
  
     0.412
Your Current Organism:
Dokdonia sp. 4H375
NCBI taxonomy Id: 983548
Other names: D. sp. 4H-3-7-5, Dokdonia sp. 4H-3-7-5, Krokinobacter sp. 4H-3-7-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.