STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PATL1Protein PAT1-like protein 1. (770 aa)    
Predicted Functional Partners:
LSM7
U6 snRNA-associated Sm-like protein LSm7.
    
 0.975
DDX6
Putative ATP-dependent RNA helicase DDX6.
   
 0.971
LSM4
U6 snRNA-associated Sm-like protein LSm4.
    
 0.968
LSM2
U6 snRNA-associated Sm-like protein LSm2.
   
 0.963
LSM1
U6 snRNA-associated Sm-like protein LSm1.
    
 0.963
LSM6
U6 snRNA-associated Sm-like protein LSm6.
    
  0.951
LSM5
U6 snRNA-associated Sm-like protein LSm5.
   
 0.946
DCP2
M7GpppN-mRNA hydrolase.
    
 0.940
LSM3
U6 snRNA-associated Sm-like protein LSm3.
    
 0.936
EDC3
Enhancer of mRNA-decapping protein 3.
    
 0.918
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.