STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBAP1LUbiquitin-associated protein 1-like. (434 aa)    
Predicted Functional Partners:
VPS25
Vacuolar protein-sorting-associated protein 25.
     
  0.517
VPS36
Vacuolar protein-sorting-associated protein 36.
     
  0.517
SNF8
Vacuolar-sorting protein SNF8.
     
  0.492
MVB12A
Multivesicular body subunit 12A.
     
  0.455
VPS37D
Vacuolar protein sorting-associated protein 37D.
     
  0.437
VPS37C
Vacuolar protein sorting-associated protein 37C.
     
  0.437
VPS37A
Vacuolar protein sorting-associated protein 37A.
     
  0.437
VPS37B
Vacuolar protein sorting-associated protein 37B.
     
  0.437
VPS28
Vacuolar protein sorting-associated protein 28-like protein.
     
  0.427
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.