STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SATB1DNA-binding protein SATB1. (645 aa)    
Predicted Functional Partners:
CASP6
Caspase-6.
    
 0.849
LMO2
Rhombotin-2.
    
 
 0.629
SOX6
Transcription factor SOX-6.
      
 0.612
UBE2I
SUMO-conjugating enzyme UBC9.
    
  0.580
CAND1
Cullin-associated NEDD8-dissociated protein 1.
     
 0.540
BCL11B
B-cell lymphoma/leukemia 11B.
   
 
 0.534
KCNS3
Potassium voltage-gated channel subfamily S member 3.
      
 0.513
ZMYM2
Zinc finger MYM-type protein 2.
    
 0.512
SST
Somatostatin.
      
 0.511
SUMO1
Small ubiquitin-related modifier 1.
    
 0.482
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.