STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC22BVesicle-trafficking protein SEC22b. (215 aa)    
Predicted Functional Partners:
STX5
Syntaxin-5 isoform X1.
   
 0.999
GOSR2
Golgi SNAP receptor complex member 2.
    
 0.997
BET1
Blocked early in transport 1.
   
 0.996
STX18
Syntaxin-18.
   
 0.994
BNIP1
Vesicle transport protein SEC20.
   
 0.989
USE1
Vesicle transport protein USE1.
    
 0.988
BET1L
BET1-like protein.
   
 0.980
YKT6
Synaptobrevin-like protein YKT6.
    
 0.972
SEC23A
Protein transport protein Sec23A.
   
 0.971
SCFD1
Sec1 family domain-containing protein 1.
   
 0.966
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.