STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC27Leucine-rich repeat-containing protein 27. (505 aa)    
Predicted Functional Partners:
CNOT1
CCR4-NOT transcription complex subunit 1.
   
 0.846
CNOT9
CCR4-NOT transcription complex subunit 9.
    
 0.798
CNOT3
CCR4-NOT transcription complex subunit 3.
    
 0.797
CNOT2
CCR4-NOT transcription complex subunit 2.
    
 0.794
CNOT4
CCR4-NOT transcription complex subunit 4 isoform X1.
    
 0.787
CNOT8
CCR4-NOT transcription complex subunit 8.
    
 0.778
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 0.778
LOC105091265
KRAB domain-containing zinc finger protein.
    
 0.717
DDX6
Putative ATP-dependent RNA helicase DDX6.
    
 0.693
ARHGAP22
Rho GTPase-activating protein 22.
      
 0.686
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.