Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CALR | CANX | ENSCDRP00005032606 | ENSCDRP00005008002 | Calreticulin. | Calnexin. | 0.966 |
CALR | EDEM3 | ENSCDRP00005032606 | ENSCDRP00005005704 | Calreticulin. | ER degradation-enhancing alpha-mannosidase-like protein 3. | 0.410 |
CALR | RPN1 | ENSCDRP00005032606 | ENSCDRP00005015439 | Calreticulin. | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1. | 0.632 |
CALR | UGGT1 | ENSCDRP00005032606 | ENSCDRP00005004383 | Calreticulin. | UDP-glucose:glycoprotein glucosyltransferase 1. | 0.649 |
CALR | UGGT2 | ENSCDRP00005032606 | ENSCDRP00005022952 | Calreticulin. | UDP-glucose:glycoprotein glucosyltransferase 2. | 0.542 |
CANX | CALR | ENSCDRP00005008002 | ENSCDRP00005032606 | Calnexin. | Calreticulin. | 0.966 |
CANX | RPN1 | ENSCDRP00005008002 | ENSCDRP00005015439 | Calnexin. | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1. | 0.562 |
CANX | UGGT1 | ENSCDRP00005008002 | ENSCDRP00005004383 | Calnexin. | UDP-glucose:glycoprotein glucosyltransferase 1. | 0.701 |
CANX | UGGT2 | ENSCDRP00005008002 | ENSCDRP00005022952 | Calnexin. | UDP-glucose:glycoprotein glucosyltransferase 2. | 0.680 |
EDEM3 | CALR | ENSCDRP00005005704 | ENSCDRP00005032606 | ER degradation-enhancing alpha-mannosidase-like protein 3. | Calreticulin. | 0.410 |
EDEM3 | RPN1 | ENSCDRP00005005704 | ENSCDRP00005015439 | ER degradation-enhancing alpha-mannosidase-like protein 3. | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1. | 0.585 |
EDEM3 | UGGT1 | ENSCDRP00005005704 | ENSCDRP00005004383 | ER degradation-enhancing alpha-mannosidase-like protein 3. | UDP-glucose:glycoprotein glucosyltransferase 1. | 0.680 |
EDEM3 | UGGT2 | ENSCDRP00005005704 | ENSCDRP00005022952 | ER degradation-enhancing alpha-mannosidase-like protein 3. | UDP-glucose:glycoprotein glucosyltransferase 2. | 0.631 |
KDELR3 | MED13 | ENSCDRP00005017275 | ENSCDRP00005007524 | ER lumen protein-retaining receptor 3. | Mediator of RNA polymerase II transcription subunit 13. | 0.621 |
KDELR3 | PID1 | ENSCDRP00005017275 | ENSCDRP00005006541 | ER lumen protein-retaining receptor 3. | PTB-containing. | 0.611 |
KDELR3 | UGGT1 | ENSCDRP00005017275 | ENSCDRP00005004383 | ER lumen protein-retaining receptor 3. | UDP-glucose:glycoprotein glucosyltransferase 1. | 0.632 |
MED13 | KDELR3 | ENSCDRP00005007524 | ENSCDRP00005017275 | Mediator of RNA polymerase II transcription subunit 13. | ER lumen protein-retaining receptor 3. | 0.621 |
MED13 | PID1 | ENSCDRP00005007524 | ENSCDRP00005006541 | Mediator of RNA polymerase II transcription subunit 13. | PTB-containing. | 0.687 |
MED13 | UGGT1 | ENSCDRP00005007524 | ENSCDRP00005004383 | Mediator of RNA polymerase II transcription subunit 13. | UDP-glucose:glycoprotein glucosyltransferase 1. | 0.702 |
OR52W1 | UGGT1 | ENSCDRP00005023373 | ENSCDRP00005004383 | Olfactory receptor 52W1. | UDP-glucose:glycoprotein glucosyltransferase 1. | 0.687 |
page 1 of 3