STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIMA1LIM domain and actin-binding protein 1 isoform X2. (760 aa)    
Predicted Functional Partners:
ANKRD54
Ankyrin repeat domain-containing protein 54.
   
 
 0.621
TMLHE
Trimethyllysine dioxygenase.
      
 0.574
FRMPD3
FERM and PDZ domain-containing protein 3.
      
 0.529
STRBP
Spermatid perinuclear RNA-binding protein.
      
 0.526
DYNLL2
Dynein light chain 2.
      
 0.523
MAEA
E3 ubiquitin-protein transferase MAEA.
      
 0.509
FBXL20
F-box/LRR-repeat protein 20.
      
 0.489
MYH9
Myosin-9.
   
 
 0.460
TWF1
Twinfilin-1.
    
 
 0.458
DYNC1LI2
Cytoplasmic dynein 1 light intermediate chain 2.
      
 0.457
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.