STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCERG1Transcription elongation regulator 1. (1093 aa)    
Predicted Functional Partners:
MFAP1
Microfibrillar-associated protein 1.
   
 0.983
PRPF38A
Pre-mRNA-splicing factor 38A.
   
 0.980
ZMAT2
U4/U6.U5 tri-snRNP component SNU23.
    
  0.975
SRRM1
Serine/arginine repetitive matrix protein 1.
   
 0.969
WBP11
WW domain-binding protein 11.
   
  0.953
RBM25
RNA-binding protein 25.
   
 
 0.934
CDC40
Pre-mRNA-processing factor 17.
    
 0.920
DDX5
Putative ATP-dependent RNA helicase DDX5.
   
  0.915
DDX46
Putative ATP-dependent RNA helicase DDX46.
   
 0.911
SRRT
Serrate RNA effector molecule-like protein.
   
 
  0.907
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.