STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYCBP2E3 ubiquitin-protein ligase MYCBP2. (4678 aa)    
Predicted Functional Partners:
FBXL3
F-box/LRR-repeat protein 3.
 
    
 0.698
SPSB4
SPRY domain-containing SOCS box protein 4.
    
 
 0.692
SPSB3
SPRY domain-containing SOCS box protein 3.
    
 
 0.692
SPSB1
SPRY domain-containing SOCS box protein 1.
    
 
 0.692
RPS27A
Ubiquitin-40S ribosomal protein S27a.
    
 
 0.677
HERC1
Putative E3 ubiquitin-protein ligase HERC1.
   
 
0.658
RAE1
mRNA export factor.
    
 
 0.631
BIRC6
Baculoviral IAP repeat-containing protein 6.
   
 
 0.624
CCS
Copper chaperone for superoxide dismutase.
      
 0.609
KCTD12
BTB/POZ domain-containing protein KCTD8/12/16.
      
 0.597
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
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