STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUF60Poly-binding-splicing factor PUF60. (577 aa)    
Predicted Functional Partners:
CHERP
Calcium homeostasis endoplasmic reticulum protein.
   
 0.926
FUBP1
Far upstream element-binding protein 1.
   
 
 0.921
SMNDC1
Survival of motor neuron-related-splicing factor 30.
   
 0.919
SNRPA1
U2 small nuclear ribonucleoprotein A.
   
 
 0.917
SNRPB2
U2 small nuclear ribonucleoprotein B.
   
 0.910
DHX15
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
 0.909
RBM17
Splicing factor 45.
   
 
0.907
PHF5A
PHD finger-like domain-containing protein 5A.
   
 
 0.905
DDX46
Putative ATP-dependent RNA helicase DDX46.
    
 0.903
U2SURP
U2 snRNP-associated SURP motif-containing protein.
   
 0.889
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.