STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM4E3 ubiquitin-protein ligase TRIM4. (475 aa)    
Predicted Functional Partners:
ZNF248
Zinc finger protein 248.
   
 0.726
TRIM66
Tripartite motif-containing protein 66.
      
 0.701
TRIM42
Tripartite motif-containing protein 42.
      
 0.688
MCM3AP
Germinal-center associated nuclear protein.
    
 
 0.672
NUP43
Nucleoporin Nup43.
     
 0.630
MEX3C
RNA-binding E3 ubiquitin-protein ligase MEX3C.
    
 0.623
CWC22
Pre-mRNA-splicing factor CWC22-like protein.
    
 
 0.622
TRIM23
E3 ubiquitin-protein ligase TRIM23.
    
 0.549
ZNF277
Zinc finger protein 277.
      
 0.521
TRIM9
E3 ubiquitin-protein ligase TRIM9.
   
 
 0.519
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.