STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAT1Protocadherin Fat 1. (4629 aa)    
Predicted Functional Partners:
MTNR1B
Melatonin receptor type 1B.
      
 0.763
SYNE1
Nesprin-1.
      
 0.759
KYAT1
Kynurenine--oxoglutarate transaminase 1.
      
 0.758
SLC36A4
Proton-coupled amino acid transporter 4.
      
 0.757
EPG5
Ectopic P granules protein 5-like protein.
      
 0.723
ATM
Serine-protein kinase ATM.
   
  
 0.669
FAT4
Protocadherin Fat 4.
   
0.592
VASP
Vasodilator-stimulated phosphoprotein.
   
 
 0.557
GCN1
eIF-2-alpha kinase activator GCN1.
   
  
 0.514
LIX1
Protein limb expression 1-like protein.
   
 0.510
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.