STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cadr_000020296Antibacterial peptide PMAP-23. (178 aa)    
Predicted Functional Partners:
ENSCDRP00005015729
Cathelicidin antimicrobial peptide.
  
 
 
0.912
NFKB1
Nuclear factor NF-kappa-B p105 subunit.
   
 
 0.912
RELA
Transcription factor p65.
   
 
 0.902
ENSCDRP00005017556
Antibacterial peptide PMAP-37-like.
  
  
 
0.901
Cadr_000020274
Neutrophilic granule protein.
   
 
 
0.661
HLA-DRA
Mamu class II histocompatibility antigen.
   
   0.531
CYP27B1
25-hydroxyvitamin D-1 alpha hydroxylase.
      
 0.502
ELANE
Neutrophil elastase.
   
 
 0.499
LCN2
Neutrophil gelatinase-associated lipocalin.
   
  
 0.452
LOC105101409
SLA class II histocompatibility antigen.
   
 
 0.451
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.