STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABGGTBGeranylgeranyl transferase type-2 subunit beta. (331 aa)    
Predicted Functional Partners:
RABGGTA
Geranylgeranyl transferase type-2 subunit alpha.
    
 0.999
CHML
Rab proteins geranylgeranyltransferase component A 2.
    
 0.970
PTP4A2
Protein tyrosine phosphatase type IVA 2.
    
 0.926
CHM
Rab proteins geranylgeranyltransferase component A 1.
    
 0.923
YKT6
Synaptobrevin-like protein YKT6.
    
 
 0.780
RAB1A
Ras-related protein Rab-1A.
    
 0.776
RAB1B
Ras-related protein Rab-1B.
    
 0.776
CLK1
Dual specificity protein kinase CLK1.
   
    0.769
RAB11B
Ras-related protein Rab-11B.
    
 0.722
GDI2
Rab GDP dissociation inhibitor beta.
   
 0.709
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.