STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3RF1E3 ubiquitin-protein ligase SH3RF1. (808 aa)    
Predicted Functional Partners:
OSBPL9
Oxysterol-binding protein-related protein 9.
   
  
 0.724
KHDRBS2
KH domain-containing.
    
 
 0.692
CSKMT
Citrate synthase-lysine N-methyltransferase CSKMT.
      
 0.687
PLEKHA2
Pleckstrin homology domain-containing family A member 2.
    
 
 0.636
GFM2
Ribosome-releasing factor 2.
      
 0.622
TUBGCP5
Gamma-tubulin complex component 5.
      
 0.614
IQCG
Dynein regulatory complex protein 9.
      
 0.607
STXBP4
Syntaxin-binding protein 4.
    
 
 0.600
SYNRG
Synergin gamma.
    
 
 0.587
ENSCDRP00005007797
annotation not available
      
 0.583
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.