STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF115E3 ubiquitin-protein ligase RNF115 isoform X1. (303 aa)    
Predicted Functional Partners:
BAG6
Large proline-rich protein BAG6.
   
 
 0.751
LRRN3
Leucine-rich repeat neuronal protein 3.
    
 0.707
SBDS
Ribosome maturation protein SBDS.
      
 0.684
SLC9A3R1
Na exchange regulatory cofactor NHE-RF1.
 
 
 
 0.626
NPNT
Nephronectin.
      
 0.572
RPS27A
Ubiquitin-40S ribosomal protein S27a.
    
 0.562
RSPO1
R-spondin-1.
   
 0.549
RSPO2
R-spondin 2.
   
 0.530
NSFL1C
NSFL1 cofactor p47.
   
 
 0.529
TMLHE
Trimethyllysine dioxygenase.
      
 0.509
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.