STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS53Vacuolar protein sorting-associated protein 53-like protein. (832 aa)    
Predicted Functional Partners:
VPS54
Vacuolar protein sorting-associated protein 54.
   
 0.999
VPS52
Vacuolar protein sorting-associated protein 52-like protein.
   
 0.999
VPS51
Vacuolar protein sorting-associated protein 51-like protein.
    
 0.998
VPS50
Syndetin.
    
 
 0.977
COG4
Conserved oligomeric Golgi complex subunit 4.
   
 
 0.939
EIPR1
EARP and GARP complex-interacting protein 1.
    
 
 0.896
COG8
Conserved oligomeric Golgi complex subunit 8.
   
 
 0.896
COG1
Conserved oligomeric Golgi complex subunit 1.
     
 0.891
COG7
Conserved oligomeric Golgi complex subunit 7.
   
 
 0.890
COG6
Conserved oligomeric Golgi complex subunit 6.
     
 0.888
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.