STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCMT2TRNA wybutosine-synthesizing protein 4. (39 aa)    
Predicted Functional Partners:
PPP2CA
Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform.
    
 0.762
PPP2CB
Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform.
    
 0.762
PPP4C
Serine/threonine-protein phosphatase 4 catalytic subunit.
    
 0.612
USP27X
Ubiquitin carboxyl-terminal hydrolase 27.
      
 0.595
PPP2R2B
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform.
    
 0.568
PPP2R2A
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform.
    
 0.568
FIGNL1
Fidgetin-like protein 1.
   
  
 0.527
KBTBD7
Kelch repeat and BTB domain-containing protein 7.
      
 0.525
PTPA
Serine/threonine-protein phosphatase 2A activator.
    
 
 0.506
PPP6C
Serine/threonine-protein phosphatase 6 catalytic subunit.
    
 0.496
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.