Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDK12 | HDGF | ENSCDRP00005006384 | ENSCDRP00005020750 | Cyclin-dependent kinase 12. | Hepatoma-derived growth factor. | 0.480 |
CDK13 | HDGF | ENSCDRP00005017658 | ENSCDRP00005020750 | Cyclin-dependent kinase 13. | Hepatoma-derived growth factor. | 0.480 |
CDYL | HDGF | ENSCDRP00005022978 | ENSCDRP00005020750 | Chromodomain Y-like protein. | Hepatoma-derived growth factor. | 0.551 |
CDYL | SMYD1 | ENSCDRP00005022978 | ENSCDRP00005019537 | Chromodomain Y-like protein. | Histone-lysine N-methyltransferase Smyd1. | 0.446 |
ENSCDRP00005025956 | HDGF | ENSCDRP00005025956 | ENSCDRP00005020750 | annotation not available | Hepatoma-derived growth factor. | 0.418 |
ENSCDRP00005025956 | PTN | ENSCDRP00005025956 | ENSCDRP00005003291 | annotation not available | Pleiotrophin. | 0.416 |
FGF2 | HDGF | ENSCDRP00005004028 | ENSCDRP00005020750 | Fibroblast growth factor 2. | Hepatoma-derived growth factor. | 0.418 |
FGF2 | PTN | ENSCDRP00005004028 | ENSCDRP00005003291 | Fibroblast growth factor 2. | Pleiotrophin. | 0.416 |
GOT2 | HDGF | ENSCDRP00005009049 | ENSCDRP00005020750 | Aspartate aminotransferase. | Hepatoma-derived growth factor. | 0.426 |
HDGF | CDK12 | ENSCDRP00005020750 | ENSCDRP00005006384 | Hepatoma-derived growth factor. | Cyclin-dependent kinase 12. | 0.480 |
HDGF | CDK13 | ENSCDRP00005020750 | ENSCDRP00005017658 | Hepatoma-derived growth factor. | Cyclin-dependent kinase 13. | 0.480 |
HDGF | CDYL | ENSCDRP00005020750 | ENSCDRP00005022978 | Hepatoma-derived growth factor. | Chromodomain Y-like protein. | 0.551 |
HDGF | ENSCDRP00005025956 | ENSCDRP00005020750 | ENSCDRP00005025956 | Hepatoma-derived growth factor. | annotation not available | 0.418 |
HDGF | FGF2 | ENSCDRP00005020750 | ENSCDRP00005004028 | Hepatoma-derived growth factor. | Fibroblast growth factor 2. | 0.418 |
HDGF | GOT2 | ENSCDRP00005020750 | ENSCDRP00005009049 | Hepatoma-derived growth factor. | Aspartate aminotransferase. | 0.426 |
HDGF | NCL | ENSCDRP00005020750 | ENSCDRP00005008349 | Hepatoma-derived growth factor. | Nucleolin. | 0.461 |
HDGF | PTN | ENSCDRP00005020750 | ENSCDRP00005003291 | Hepatoma-derived growth factor. | Pleiotrophin. | 0.632 |
HDGF | SMYD1 | ENSCDRP00005020750 | ENSCDRP00005019537 | Hepatoma-derived growth factor. | Histone-lysine N-methyltransferase Smyd1. | 0.425 |
NCL | HDGF | ENSCDRP00005008349 | ENSCDRP00005020750 | Nucleolin. | Hepatoma-derived growth factor. | 0.461 |
NCL | PTN | ENSCDRP00005008349 | ENSCDRP00005003291 | Nucleolin. | Pleiotrophin. | 0.433 |
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