STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS4BVacuolar protein sorting-associated protein 4B. (444 aa)    
Predicted Functional Partners:
VTA1
Vacuolar protein sorting-associated protein VTA1-like protein.
   
 0.999
VPS4A
Vacuolar protein sorting-associated protein 4A.
  
 
0.995
CHMP5
Charged multivesicular body protein 5.
   
 0.995
CHMP1A
Charged multivesicular body protein 1a.
   
 0.983
LOC105093741
Charged multivesicular body protein 1b.
   
 0.975
CHMP6
Charged multivesicular body protein 6.
    
 0.963
CHMP2A
Charged multivesicular body protein 2a.
    
 0.954
IST1
IST1-like protein.
   
 0.945
CHMP2B
Charged multivesicular body protein 2b.
   
 0.933
MLKL
Mixed lineage kinase domain-like protein isoform X2.
    
 0.908
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.