STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNRNP40U5 small nuclear ribonucleoprotein 40 kDa protein. (358 aa)    
Predicted Functional Partners:
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
   
 0.997
PRPF8
Pre-mRNA-processing-splicing factor 8.
   
 0.997
PRPF6
Pre-mRNA-processing factor 6.
   
 0.997
SNRNP200
U5 small nuclear ribonucleoprotein 200 kDa helicase.
   
 0.991
DDX23
Putative ATP-dependent RNA helicase DDX23.
    
 0.977
SNRPD2
Small nuclear ribonucleoprotein Sm D2.
   
 0.975
BUD31
Protein BUD31-like protein.
   
 
 0.974
SNRPF
Small nuclear ribonucleoprotein F.
   
  0.969
PRPF19
Pre-mRNA-processing factor 19.
   
 
0.958
MFAP1
Microfibrillar-associated protein 1.
 
 
   0.954
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.