STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDKAL1Threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1. (583 aa)    
Predicted Functional Partners:
EXOSC3
Exosome complex component RRP40.
    
 
 0.707
TRMT10A
tRNA methyltransferase 10-like protein A.
   
  
 0.638
ENSCDRP00005019557
annotation not available
   
 
 0.634
UROD
Uroporphyrinogen decarboxylase.
   
 
 0.634
MMS19
MMS19 nucleotide excision repair protein-like protein.
   
 
 0.604
TRMO
tRNA-methyltransferase.
  
  
 0.566
TMEM38B
Trimeric intracellular cation channel type B isoform X1.
   
  
 0.531
SLC39A5
Zinc transporter ZIP5.
     
 0.528
TTC6
Tetratricopeptide repeat protein 6.
     
 0.528
CDC123
Cell division cycle protein 123 homolog.
      
 0.526
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.