STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIF1Telomere-associated protein RIF1. (2469 aa)    
Predicted Functional Partners:
PAXIP1
PAX-interacting protein 1.
   
 0.925
ATM
Serine-protein kinase ATM.
   
 0.811
SBNO1
Protein strawberry notch-like protein 1.
   
  
 0.786
BDP1
Transcription factor TFIIIB component B''-like protein.
   
    0.782
HEATR1
HEAT repeat-containing protein 1.
   
  
 0.717
PIAS4
E3 SUMO-protein ligase PIAS4 isoform X1.
    
 0.688
TP53BP1
TP53-binding protein 1.
   
 0.660
BTAF1
TATA-binding protein-associated factor 172.
   
 
 0.659
N4BP2
NEDD4-binding protein 2.
   
  
 0.656
PDS5A
Sister chromatid cohesion protein PDS5-like protein A.
   
   0.655
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.