STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABL6Rab-like protein 6. (681 aa)    
Predicted Functional Partners:
RABGGTA
Geranylgeranyl transferase type-2 subunit alpha.
    
 0.823
CCDC186
Coiled-coil domain-containing protein 186.
    
 
 0.765
CCDC138
Coiled-coil domain-containing protein 138.
      
 0.764
TRAPPC1
Trafficking protein particle complex subunit 1.
    
 0.749
TRAPPC4
Trafficking protein particle complex subunit 4.
    
 0.748
TRAPPC5
LOW QUALITY PROTEIN: trafficking protein particle complex subunit 5.
    
 0.737
TRAPPC8
Trafficking protein particle complex subunit 8.
    
 0.735
TRAPPC2B
Trafficking protein particle complex subunit 2.
    
 0.726
VPS33B
Vacuolar protein sorting-associated protein 33B.
    
 
 0.711
RABL3
Rab-like protein 3.
      
 0.701
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.